BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A08LP1|AL427243
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1884 0.0
>3x_Contig1446
Length = 10598
Score = 1884 bits (946), Expect = 0.0
Identities = 981/994 (98%), Gaps = 4/994 (0%)
Strand = Plus / Minus
Query: 1 atcaatatatggccaggcagagtactacgtgactagccaattgcaccaattactatattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 atcaatatatggccaggcagagtactacgtgactagccaattgcaccaattactatattc 2289
Query: 61 aaattttaaggattagtttgaaagagctatctttgcacaaaggttttatttcagatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 aaattttaaggattagtttgaaagagctatctttgcacaaaggttttatttcagatcaaa 2229
Query: 121 gttgatgaggcattcaccacaatgtcagagaarwcagacaaaacgtatacaactggacga 180
|||||||||||||||||||||||||| | | |||||||||||||| |||||||||||
Sbjct: 2228 gttgatgaggcattcaccacaatgtcgggg---tcagacaaaacgtat-caactggacga 2173
Query: 181 gactactttatacagtgtattgaatctcaagtatggtgcaacagaagtacagataaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 gactactttatacagtgtattgaatctcaagtatggtgcaacagaagtacagataaggaa 2113
Query: 241 ggcttacatgaagcttgcccgggaattacatccagataaatcaaagtctgaagaagcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 ggcttacatgaagcttgcccgggaattacatccagataaatcaaagtctgaagaagcagg 2053
Query: 301 tgagttgtwcaagaaagttgcacacgctcatttcattcttacagataagaaggagaagat 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 tgagttgttcaagaaagttgcacacgctcatttcattcttacagataagaaggagaagat 1993
Query: 361 gaaatatgatagchaacttttggcaaaaggtttatatgattattctccacgcataccaaa 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 gaaatatgatagcaaacttttggcaaaaggtttatatgattattctccacgcataccaaa 1933
Query: 421 tgataaaagccgacaaaatgggatgttcaaagacactgctaagaattctaagactttcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 tgataaaagccgacaaaatgggatgttcaaagacactgctaagaattctaagactttcac 1873
Query: 481 caacaataataataaggatgatgccagcgctgatacatcgaaatctaagccaagaaagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 caacaataataataaggatgatgccagcgctgatacatcgaaatctaagccaagaaagag 1813
Query: 541 ccggccctacgaggagcaaccatacggatttggtgtagatactggtcgcggatcaggtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 ccggccctacgaggagcaaccatacggatttggtgtagatactggtcgcggatcaggtaa 1753
Query: 601 aaacattccactctttaagactttcaatgccaagagttatcagaatagcaagaagtctgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1752 aaacattccactctttaagactttcaatgccaagagttatcagaatagcaagaagtctgt 1693
Query: 661 taccccaccgagaccgaaacaaccctctgamaaahataagcgagcgacttcgttctccaa 720
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1692 aaccccaccgagaccgaaacaaccctctgaaaaaaataagcgagcgacttcgttctccaa 1633
Query: 721 tgagaacagaaactctagttctgtaccactggcaaaaaaccaggctaaaaagacggctaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 tgagaacagaaactctagttctgtaccactggcaaaaaaccaggctaaaaagacggctaa 1573
Query: 781 ttcagggtctgctgttggatctgaatcaaggatctcatcatcgggttcagaatcatcttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 ttcagggtctgctgttggatctgaatcaaggatctcatcatcgggttcagaatcatcttc 1513
Query: 841 aaatgtcaattctgctacgggttcttcggaggaacctgacgtacacacccagcataaaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 aaatgtcaattctgctacgggttcttcggaggaacctgacgtacacacccagcataaaat 1453
Query: 901 ggccagaaaggacagttaccttagtggattccaaagcaaggccagaagcccagaatctcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 ggccagaaaggacagttaccttagtggattccaaagcaaggccagaagcccagaatctcc 1393
Query: 961 tttccaagacccagcacaacggcattgtgtgaga 994
|||||||||||||||||||||||||| |||||||
Sbjct: 1392 tttccaagacccagcacaacggcattttgtgaga 1359
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6935
Number of Sequences: 1807
Number of extensions: 6935
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)